Date
June 6, 2025
Hours
1
Tags
Personal HealthDNA
The repo is still private for now, but this morning I got right to it.
I had been building a 38 → 37 liftover downgrade for my local GWAS Association DuckDB. However I realized it would probably be much easier to upgrade the input genotype to 38, as both the GWAS and Reference Panel set in Google public genetic dataset are GRCh38.
So I was able to nuke all the things.
I also updated the spec to grab BQ data from Google, and to create reference stats on the fly and upload. Should be ready to implement now.